Insertion junction: CLIP2.073730_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.073730
Chromosome:chromosome 1
Location:3866007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g025400 HYD3,HYDIN1 (1 of 1) K17570 - hydrocephalus-inducing protein (HYDIN); Hydrocephalus 3-Like Protein Hydin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAAACGGTGGGGCAGAGGACGCAGGAAGAGGCAGAGAAGGAGAGTAAGG
Internal bar code:ACCACTAAAAGTTCTAGACCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2768
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTTTGGCTACGTGGTCA
Suggested primer 2:TGGACATGATGACCTTGGCC