Insertion junction: CLIP2.006830_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006830
Chromosome:chromosome 9
Location:936794
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402950 CGL21 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAAACCCAGATGGGCTAAGGCGAGGAGCATGGGGGTCATTCGAGGTTC
Internal bar code:CACAGTGTGACTAGCGTCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:587
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGAAGGACTGCGTGTTC
Suggested primer 2:ATGCGTGTGGGAAGTTGGAT