Insertion junction: CLIP2.006941_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.006941
Chromosome:chromosome 12
Location:9122530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543900 PTP6 Protein tyrosine phosphatase; (1 of 2) 3.1.3.2//3.1.3.48 - Acid phosphatase / Phosphomonoesterase // Protein-tyrosine-phosphatase / PTPase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATTTACGAATGTCGCCCTTTCGAACTTTGTTTACAGCGGCACTGAGC
Internal bar code:GGACCTGACCAGTCCGCTCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3823
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAGAGAGGAGGAGGAGG
Suggested primer 2:CGTATGGCTTGTCATGCACG