Insertion junction: CLIP2.007017_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007017
Chromosome:chromosome 9
Location:2351225
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394150 RAA1,OPR40 psaA mRNA trans-splicing factor; (1 of 3) PF06743 - FAST kinase-like protein, subdomain 1 (FAST_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAGAGAGCGCGGCATGCGCGTCCCGCCTCGCGCCCGGCAGACGCCGG
Internal bar code:ATTATGTCCATGCATGGGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:998
LEAP-Seq percent confirming:90.2439
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGGACCCAAACCATGTAGCC
Suggested primer 2:CTTTCGCTCAGGTGTCGAGT