Insertion junction: CLIP2.007080_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007080
Chromosome:chromosome 9
Location:80508
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g386200 OPR36 OctotricoPeptide Repeat protein 36 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGCGACACCCTCAAAAGCCGCCTACGCGGGATCCAGGCTAGGCACTG
Internal bar code:GTGGATGCCACAGGAGAAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:855
LEAP-Seq percent confirming:29.4118
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGACTGCCCTCATCCC
Suggested primer 2:CAAGTTGGGCCCTGATAGCA