Insertion junction: CLIP2.007082_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007082
Chromosome:chromosome 1
Location:1785115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009900 CDJ3 Chloroplast DnaJ-like protein 3; (1 of 2) IPR001080//IPR001623//IPR017896 - 3Fe-4S ferredoxin // DnaJ domain // 4Fe-4S ferredoxin-type, iron-sulphur binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTCCCCCGCCCTGTATCCTGGCCGCGCTCTGCCAAAACCAATAACCC
Internal bar code:GATATTGGGTCCTTACGTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2776
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTATCTGGCATGTCGG
Suggested primer 2:CAAACACTCACGCATGCACA