Gene: Cre01.g009900
Overview
| Common name: | CDJ3 |
| Defline: | Chloroplast DnaJ-like protein 3; (1 of 2) IPR001080//IPR001623//IPR017896 - 3Fe-4S ferredoxin // DnaJ domain // 4Fe-4S ferredoxin-type, iron-sulphur binding domain |
| Description: | Contains N-terminal J-domain (pfam226) and bacterial-type Ferredoxin domain (COG1141, [4Fe4S]); not involved in protein folding, but stimulates ATPase activity of HSP70B; in same clade as CDJ4 |
| Synonyms: | CDJ3,g250.t1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g009900 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g009900-Venus-3xFLAG
Imaged strain: CSI_LW07E1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
shapes in cytoplasm/a few medium patches in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002996_1 | CLIP2.002996 | CDS | 80 | 6.1 |
| CLIP2.002996_2 | CLIP2.002996 | CDS | 80 | 6.1 |
| CLIP2.003840_1 | CLIP2.003840 | intron | 80 | 6.1 |
| CLIP2.003840_2 | CLIP2.003840 | intron | 80 | 6.1 |
| CLIP2.005652_1 | CLIP2.005652 | 3'UTR | 80 | 6.1 |
| CLIP2.007082_1 | CLIP2.007082 | intron | 80 | 6.1 |
| CLIP2.007082_2 | CLIP2.007082 | intron | 80 | 6.1 |
| LMJ.RY0402.174604_1 | LMJ.RY0402.174604 | intron | 95 | 5.5 |
| LMJ.RY0402.174604_2 | LMJ.RY0402.174604 | intron | 95 | 5.5 |
| LMJ.RY0402.176901_1 | LMJ.RY0402.176901 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.227172_1 | LMJ.RY0402.227172 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.237121_1 | LMJ.RY0402.237121 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.237913_1 | LMJ.RY0402.237913 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.247111_1 | LMJ.RY0402.247111 | CDS | 73 | 5.5 |
| LMJ.RY0402.248129_1 | LMJ.RY0402.248129 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.252866_1 | LMJ.RY0402.252866 | CDS | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00226, PF13370 |
| PANTHER: | PTHR24078 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0005506, GO:0009055 |
| Best arabidopsis TAIR name: | AT2G42750 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | DNAJ heat shock N-terminal domain-containing protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.