Insertion junction: LMJ.RY0402.237121_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.237121
Chromosome:chromosome 1
Location:1831224
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g009900 CDJ3 Chloroplast DnaJ-like protein 3; (1 of 2) IPR001080//IPR001623//IPR017896 - 3Fe-4S ferredoxin // DnaJ domain // 4Fe-4S ferredoxin-type, iron-sulphur binding domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAATGAAGGCCCGGAGGGAAGAAGCGAGT
Internal bar code:TGTGTGCGGTGCCACGGGCCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:589
LEAP-Seq percent confirming:98.9452
LEAP-Seq n confirming:3846
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGTCCTACGTTTGATTA
Suggested primer 2:CTTCGCGTGTGAGCATACAT