Insertion junction: LMJ.RY0402.174604_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.174604
Chromosome:chromosome 1
Location:1834899
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g009900 CDJ3 Chloroplast DnaJ-like protein 3; (1 of 2) IPR001080//IPR001623//IPR017896 - 3Fe-4S ferredoxin // DnaJ domain // 4Fe-4S ferredoxin-type, iron-sulphur binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACATAGCCGGTGTCGAAGGAGGTATC
Internal bar code:GGTTCTATTTATACAAGTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:98.8924
LEAP-Seq n confirming:9821
LEAP-Seq n nonconfirming:110
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGAAAACGAAGAGTGTA
Suggested primer 2:TTGGCAGATGTGGTGTTGTT