Insertion junction: LMJ.RY0402.247111_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.247111
Chromosome:chromosome 1
Location:1834639
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g009900 CDJ3 Chloroplast DnaJ-like protein 3; (1 of 2) IPR001080//IPR001623//IPR017896 - 3Fe-4S ferredoxin // DnaJ domain // 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGTGAGGCAGAGGGGGCTAGCAGGGGAG
Internal bar code:GATACGAGATGTACACGATGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:289
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:164
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTACAGGGCAAGCCTTA
Suggested primer 2:CACACACACACACACACGGT