Insertion junction: LMJ.RY0402.252866_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.252866
Chromosome:chromosome 1
Location:1832985
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g009900 CDJ3 Chloroplast DnaJ-like protein 3; (1 of 2) IPR001080//IPR001623//IPR017896 - 3Fe-4S ferredoxin // DnaJ domain // 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGCCCCAGCCGGCCTTCTTGGCGGCGGG
Internal bar code:GAGTGCCGGGTAATCTCAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:99.1315
LEAP-Seq n confirming:799
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCACATGGCAACAAAAAT
Suggested primer 2:CCGTGTGTGTGTGTGTGTGT