Insertion junction: CLIP2.007135_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007135
Chromosome:chromosome 9
Location:4527320
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g400997 (1 of 7) IPR001024 - PLAT/LH2 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTACATGCTGCTTCTGTCTGCCCGCCCACGTGCCTGCCTGTCCTTCCG
Internal bar code:TAAAGAAGTATGGGCTTGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAAAGCGACCGAAAAACG
Suggested primer 2:GCATCATCGTCGTTGTCAGC