Insertion junction: CLIP2.007279_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007279
Chromosome:chromosome 2
Location:2007190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088400 DEG1,DEG1A (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAATCTTCCGGAAGAATACCCCCAGCGTGGTCAACGTTACGAACCTG
Internal bar code:GCATCCTAAAAGCCTACTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1931
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACACTCAAACACATGT
Suggested primer 2:CTGAGCGAGCTAGCATGTGA