Insertion junction: CLIP2.007368_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007368
Chromosome:chromosome 17
Location:421115
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698750 RAA12,OPR104 psaA mRNA trans-splicing factor of subcomplex I; (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCCGCGCGCGGACCCCGTCGCCCAACTAGTTACAGATCTATACTAAC
Internal bar code:TGCGGCTCCCCCCGACCCGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCATCAACTCCACAAGCT
Suggested primer 2:GCCGCTATCACTCTTTCCGA