| Common name: | RAA12,OPR104 |
| Defline: | psaA mRNA trans-splicing factor of subcomplex I; (1 of 781) IPR000104 - Antifreeze protein, type I |
| Description: | Necessary for trans-splicing of psaA mRNA; OctotricoPeptide (octotricoPeptide) Repeat (OPR) Protein; Component of psaA trans-splicing sub complex I |
| Synonyms: | OPR104,g16948.t1,Cre17.g698750.t1.1 |
| Chromosome: | chromosome 17 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002932_1 | CLIP2.002932 | CDS | 80 | 6.1 |
| CLIP2.002932_2 | CLIP2.002932 | CDS | 80 | 6.1 |
| CLIP2.002956_1 | CLIP2.002956 | CDS | 80 | 6.1 |
| CLIP2.002956_2 | CLIP2.002956 | CDS | 80 | 6.1 |
| CLIP2.006011_1 | CLIP2.006011 | CDS | 80 | 6.1 |
| CLIP2.006936_1 | CLIP2.006936 | 3'UTR | 63 | 6.1 |
| CLIP2.007368_1 | CLIP2.007368 | intron | 80 | 6.1 |
| CLIP2.007368_2 | CLIP2.007368 | intron | 80 | 6.1 |
| CLIP2.007490_1 | CLIP2.007490 | intron | 80 | 6.1 |
| CLIP2.007490_2 | CLIP2.007490 | intron | 80 | 6.1 |
| LMJ.RY0402.108959_1 | LMJ.RY0402.108959 | intron | 73 | 5.5 |
| LMJ.RY0402.172206_2 | LMJ.RY0402.172206 | intron | 73 | 5.5 |
| LMJ.RY0402.223129_1 | LMJ.RY0402.223129 | intron | 95 | 5.5 |
| LMJ.RY0402.223129_2 | LMJ.RY0402.223129 | intron | 95 | 5.5 |
| PFAM: | |
| PANTHER: | PTHR21228 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0042309, GO:0050825, GO:0050826 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Photosynthesis or light sensitivity, screen 6 of 12 ( 77% confidence (FDR = 0.23)) |
| Photosynthesis or light sensitivity, screen 7 of 12 ( 77% confidence (FDR = 0.23)) |
| Photosynthesis or light sensitivity, screen 8 of 12 ( 78% confidence (FDR = 0.22)) |
| Photosynthesis or light sensitivity, screen 10 of 12 ( 76% confidence (FDR = 0.24)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.