Insertion junction: LMJ.RY0402.223129_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.223129
Chromosome:chromosome 17
Location:396039
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g698750 RAA12,OPR104 psaA mRNA trans-splicing factor of subcomplex I; (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTATACTAACATACTCACCTGAGCTCAAA
Internal bar code:GCTGGACGCCACGGCCCGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:242
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGTGTCTGTGCTGTTG
Suggested primer 2:CGTTCTGCTACACTCGCTCA