Insertion junction: LMJ.RY0402.172206_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.172206
Chromosome:chromosome 17
Location:393679
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g698750 RAA12,OPR104 psaA mRNA trans-splicing factor of subcomplex I; (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCGGCACCAGCAATTCGGAGTTACCT
Internal bar code:GCGCAGGGCGGAGCGTGAGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:434
LEAP-Seq percent confirming:91.3174
LEAP-Seq n confirming:305
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTTTGTTGGGCAAG
Suggested primer 2:ACCGCCTCCTTCTACCTGAT