Insertion junction: LMJ.RY0402.108959_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.108959
Chromosome:chromosome 17
Location:392408
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g698750 RAA12,OPR104 psaA mRNA trans-splicing factor of subcomplex I; (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCTGCCTTGCACCGCGCCTCGCTGTAC
Internal bar code:CGGCCGACTGGTCGGGGAGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:124
LEAP-Seq percent confirming:98.6928
LEAP-Seq n confirming:151
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AATACATATAGCGGCGGCAC
Suggested primer 2:ATCAGGTAGAAGGAGGCGGT