Insertion junction: CLIP2.007396_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007396
Chromosome:chromosome 6
Location:8413126
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g308150 DNJ23 (1 of 2) K09531 - DnaJ homolog subfamily C member 11 (DNAJC11); DnaJ-like protein gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCATAGCGTCACTGTTCGGCTGGCTTGCACCATGGGTCACGGATCTAA
Internal bar code:GGTACACGTTAATTGTTATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:747
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGTAGATGTAGCGCAGG
Suggested primer 2:GGATCCCCTTTCCACACCTG