Insertion junction: CLIP2.007404_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007404
Chromosome:chromosome 12
Location:3675796
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g513700 HEL52 DEAD box ATP-dependent RNA helicase; (1 of 1) K14808 - ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13] (DDX54, DBP10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAAATCAGCGCGCATGCGGCCCGCGTCCAGCCCAGACGCACCCGTCA
Internal bar code:CGTCTTCTCTGGTGGTTGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2702
LEAP-Seq percent confirming:64.5161
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGAGGTAGTGTTGCGGT
Suggested primer 2:ACATTCGAACGGAAGGCTGT