Insertion junction: CLIP2.007508_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.007508
Chromosome:chromosome 13
Location:1255032
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g570550 CDD1 Cytidine deaminase; (1 of 1) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAAAGCGGGCATGCGGGCGTGGTGGCAGAGGATGTGGAAGCAGCGGGC
Internal bar code:CAATCTTTGATACGTTCCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:218
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGGTTCACAGACACGAC
Suggested primer 2:TTCATCCCAGTTCGCAAGCT