Insertion junction: CLIP2.007601_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007601
Chromosome:chromosome 7
Location:2453571
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g329150 SPL21,SPLH1 DEAH-box helicase, possible nuclear pre-mRNA splicing factor, N-terminal; (1 of 3) K12818 - ATP-dependent RNA helicase DHX8/PRP22 (DHX8, PRP22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGGCGGCTGGCGGTTAACTCTGCAAGCCACTCCCAGTTGTCAGGGA
Internal bar code:ATCAAATACTTTTTGCGGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:67
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGTGCATGTATGAATGT
Suggested primer 2:AACATCACCGCCCTCGAATT