Insertion junction: CLIP2.007612_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.007612
Chromosome:chromosome 12
Location:2109813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510050 CTH1,CHL27B,CTH1B,CTH1A Copper target homolog 1, chloroplast precursor%252C functional variant; (1 of 2) 1.14.13.81 - Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase / Mg-protoporphyrin IX monomethyl ester oxidative cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGCGGATGCGAATGCATTGGAGAGGAGAGGGAGTGAATTACCCGTCA
Internal bar code:TAATCAGAATTAGAGTAATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3184
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATAGTGGCGCAAATGGC
Suggested primer 2:CTCTATGCGCAGACCTGGAG