Insertion junction: CLIP2.007683_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.007683
Chromosome:chromosome 6
Location:111237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249750 (1 of 1) PF07382//PF13374 - Histone H1-like nucleoprotein HC2 (HC2) // Tetratricopeptide repeat (TPR_10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCGGGAGCTGGCCTCCCGCTCCCCACTCCATGGCGGCACATGGCGG
Internal bar code:AGGTTAGTATTGCGGGTGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2510
LEAP-Seq percent confirming:98.2143
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTTCGTTTGGGGTTCCC
Suggested primer 2:GACAGTGAGGAGGACAAGGC