Insertion junction: CLIP2.007683_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007683
Chromosome:chromosome 6
Location:111287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249750 (1 of 1) PF07382//PF13374 - Histone H1-like nucleoprotein HC2 (HC2) // Tetratricopeptide repeat (TPR_10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGCCGCTGTAACCGCCGCCCGCCACGTCCCCCATGCAGCCCTAACCC
Internal bar code:AGGTTAGTATTGCGGGTGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:3.57143
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGTGAGGAGGACAAGGC
Suggested primer 2:TAGCTTCGTTTGGGGTTCCC