Insertion junction: CLIP2.007932_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007932
Chromosome:chromosome 14
Location:1069306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614400 SRH23 (1 of 1) K15711 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:3.6.4.- 6.3.2.19] (SMARCA3, HLTF); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTGGACGGCAGAGCCACCAGCGGCCGGCCGGCGGGACCCACCTGCGG
Internal bar code:GTCGGGTGTGACTTACAATAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:85
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCGGAAGTTTGTGTGTG
Suggested primer 2:TGCGTTGAAGATGTCGGACA