Gene: Cre14.g614400

Overview

Common name:SRH23
Defline:(1 of 1) K15711 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:3.6.4.- 6.3.2.19] (SMARCA3, HLTF); SNF2-related DNA/RNA helicase
Description:SNF2-related helicase. ChromoDB CHR3418
Synonyms:g14804.t1,SRH23
Chromosome:chromosome 14

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.007932_4 CLIP2.007932 CDS 80 6.1
CLIP2.007932_5 CLIP2.007932 CDS 80 6.1
CLIP2.027554_1 CLIP2.027554 intron 80 6.1
CLIP2.027554_2 CLIP2.027554 intron 80 6.1
CLIP2.032804_1 CLIP2.032804 CDS 80 6.1
CLIP2.032804_2 CLIP2.032804 CDS 80 6.1
CLIP2.032897_1 CLIP2.032897 CDS 80 6.1
CLIP2.032897_2 CLIP2.032897 CDS 80 6.1
CLIP2.036018_1 CLIP2.036018 CDS 80 6.1
CLIP2.036018_2 CLIP2.036018 CDS 80 6.1
CLIP2.038685_3 CLIP2.038685 intron 40 6.1
CLIP2.038750_1 CLIP2.038750 CDS 80 6.1
CLIP2.038750_2 CLIP2.038750 CDS 80 6.1
LMJ.RY0402.039648_1 LMJ.RY0402.039648 intron 95 5.5
LMJ.RY0402.039648_2 LMJ.RY0402.039648 intron 95 5.5
LMJ.RY0402.046816_1 LMJ.RY0402.046816 intron 73 5.5
LMJ.RY0402.054431_1 LMJ.RY0402.054431 intron 95 5.5
LMJ.RY0402.054431_2 LMJ.RY0402.054431 intron 95 5.5
LMJ.RY0402.123712_1 LMJ.RY0402.123712 intron 73 5.5
LMJ.RY0402.125207_1 LMJ.RY0402.125207 CDS 58 5.5
LMJ.RY0402.137080_2 LMJ.RY0402.137080 intron 73 5.5
LMJ.RY0402.149355_1 LMJ.RY0402.149355 CDS 58 5.5
LMJ.RY0402.155659_1 LMJ.RY0402.155659 intron 95 5.5
LMJ.RY0402.155659_2 LMJ.RY0402.155659 intron 95 5.5
LMJ.RY0402.159145_1 LMJ.RY0402.159145 CDS 95 5.5
LMJ.RY0402.159145_2 LMJ.RY0402.159145 CDS 95 5.5
LMJ.RY0402.197652_1 LMJ.RY0402.197652 intron 95 5.5
LMJ.RY0402.197652_2 LMJ.RY0402.197652 intron 95 5.5
LMJ.RY0402.199210_1 LMJ.RY0402.199210 intron 95 5.5
LMJ.RY0402.199210_2 LMJ.RY0402.199210 intron 95 5.5
LMJ.RY0402.209855_1 LMJ.RY0402.209855 intron 95 5.5
LMJ.RY0402.209855_2 LMJ.RY0402.209855 CDS 95 5.5
LMJ.RY0402.210650_3 LMJ.RY0402.210650 intron 73 5.5
LMJ.RY0402.219976_1 LMJ.RY0402.219976 intron 73 5.5
LMJ.RY0402.219976_2 LMJ.RY0402.219976 intron 58 5.5
LMJ.RY0402.223779_1 LMJ.RY0402.223779 CDS 73 5.5
LMJ.RY0402.244948_2 LMJ.RY0402.244948 3'UTR 73 5.5
LMJ.SG0182.007233_1 LMJ.SG0182.007233 CDS 75 5.3

Gene Annotations

PFAM:PF00176, PF00271, PF08797, PF13639
PANTHER: PTHR10799
KEGG_ec:
KEGG_orthology:K15711
KOG:KOG1001
Gene ontology terms::GO:0003676, GO:0005515, GO:0005524, GO:0008270, GO:0016818
Best arabidopsis TAIR name:AT5G05130
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:DNA/RNA helicase protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Rose Bengal, screen 1 of 4 ( 78% confidence (FDR = 0.22))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.