Insertion junction: CLIP2.038750_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.038750
Chromosome:chromosome 14
Location:1063742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g614400 SRH23 (1 of 1) K15711 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:3.6.4.- 6.3.2.19] (SMARCA3, HLTF); SNF2-related DNA/RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTTCTGGGAGCAAGTGCCCGGCACTGCCCCGCGCTTTCGCAGCACGCTG
Internal bar code:CAAGGGGGCCGATATTAGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1813
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGATGAGGGAGATGACTG
Suggested primer 2:CACACGGGTGCAGAAAACAG