Insertion junction: CLIP2.007965_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.007965
Chromosome:chromosome 12
Location:5935975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533750 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAGCTAGCGTCACACGCCAGCAGCACAGGCGGCCCTCCCCCCGAGTT
Internal bar code:GGCGATCGGCCGTAGTCTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3339
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGGATAATAGGCGGCAC
Suggested primer 2:GTCACTATCTGGCCGAGACG