Gene: Cre12.g533750

Overview

Common name:
Defline:	(1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT)
Description:
Synonyms:	g13129.t1
Chromosome:	chromosome 12

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.007965_1	CLIP2.007965	CDS	80	6.1
CLIP2.007965_2	CLIP2.007965	CDS	80	6.1
CLIP2.011354_1	CLIP2.011354	intron	80	6.1
CLIP2.011354_2	CLIP2.011354	intron	80	6.1
CLIP2.025205_1	CLIP2.025205	intron	80	6.1
CLIP2.025205_2	CLIP2.025205	intron	80	6.1
CLIP2.026186_1	CLIP2.026186	outside_mRNA	80	6.1
CLIP2.026186_2	CLIP2.026186	outside_mRNA	80	6.1
CLIP2.026186_3	CLIP2.026186	outside_mRNA	80	6.1
CLIP2.029218_1	CLIP2.029218	intron	80	6.1
CLIP2.029218_2	CLIP2.029218	intron	80	6.1
CLIP2.031910_1	CLIP2.031910	outside_mRNA	80	6.1
CLIP2.031910_2	CLIP2.031910	outside_mRNA	80	6.1
CLIP2.041139_1	CLIP2.041139	CDS	80	6.1
CLIP2.041139_2	CLIP2.041139	CDS	80	6.1
LMJ.RY0402.091961_1	LMJ.RY0402.091961	3'UTR	73	5.5
LMJ.RY0402.162279_3	LMJ.RY0402.162279	3'UTR	58	5.5
LMJ.RY0402.166909_1	LMJ.RY0402.166909	CDS	95	5.5
LMJ.RY0402.166909_2	LMJ.RY0402.166909	CDS	95	5.5
LMJ.RY0402.169061_1	LMJ.RY0402.169061	CDS	73	5.5
LMJ.RY0402.192700_1	LMJ.RY0402.192700	intron	73	5.5
LMJ.RY0402.217239_3	LMJ.RY0402.217239	3'UTR	73	5.5
LMJ.RY0402.226232_2	LMJ.RY0402.226232	intron	73	5.5
LMJ.RY0402.255109_1	LMJ.RY0402.255109	CDS	73	5.5
LMJ.SG0182.012355_1	LMJ.SG0182.012355	CDS	75	5.3

Gene Annotations

PFAM:	PF00632
PANTHER:	PTHR11254
KEGG_ec:	EC:6.3.2.19
KEGG_orthology:
KOG:	KOG0940
Gene ontology terms::	GO:0004842
Best arabidopsis TAIR name:	AT4G12570.1
Best arabidopsis TAIR symbol:	UPL5
Best arabidopsis TAIR defline:	ubiquitin protein ligase 5
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

UV radiation, screen 2 of 2 ( 92% confidence (FDR = 0.08))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.