Insertion junction: CLIP2.026186_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.026186
Chromosome:chromosome 12
Location:5937525
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533750 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT) outside_mRNA
Cre12.g533800 CYN22 Cyclophilin 22; (1 of 1) K09567 - peptidyl-prolyl isomerase H (cyclophilin H) (PPIH, CYPH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGCCCATACTGTACGCCGCACCCTCCAAAGCCCAAATCATCCCAAGT
Internal bar code:GCCACGACCAAGGCACGCCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1752
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGATGGAGCATGGAGGGC
Suggested primer 2:TTTGGCACGGTACTCTGTCC