Insertion junction: CLIP2.031910_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.031910
Chromosome:chromosome 12
Location:5938075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533750 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT) outside_mRNA
Cre12.g533800 CYN22 Cyclophilin 22; (1 of 1) K09567 - peptidyl-prolyl isomerase H (cyclophilin H) (PPIH, CYPH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCATGCACCGCAGCGGGGCGGCGGGCCGGCGAAAGACCGGCGGAAGGC
Internal bar code:TGTCGCATGTTAAGGGGCCTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1550
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGCATACACGGTAACAC
Suggested primer 2:CCCAAAGACGGCTGAGAACT