Insertion junction: CLIP2.025205_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.025205
Chromosome:chromosome 12
Location:5936434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533750 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAGTCGCCAACAACCGCCGAACCCGATCATGGCACTTCACGGCGCAT
Internal bar code:CCTACGATGGTTGCGCCATCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2958
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTCCATGCTCCATCTAC
Suggested primer 2:CCTGCTGTACCTGATGCTGT