Insertion junction: CLIP2.007965_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.007965
Chromosome:chromosome 12
Location:5935977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533750 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCGGAAACTTCAACCCTGGTTTCATCTTTGCCGGCCTAGTCGCTGGG
Internal bar code:GGCGATCGGCCGTAGTCTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1502
LEAP-Seq percent confirming:78.9474
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTCACTATCTGGCCGAGACG
Suggested primer 2:TGACGGATAATAGGCGGCAC