Insertion junction: CLIP2.011354_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.011354
Chromosome:chromosome 12
Location:5931802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533750 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTGCGGCCCGCTGCCGCCTCCCGACCTCCCAGTCCCGGAGCCCTTGA
Internal bar code:CAATTTCTCAGCGTAATATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3067
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGAAAGTGGCGGTCAC
Suggested primer 2:CTCCGCCCAGCTTCATGATC