Insertion junction: CLIP2.008076_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008076
Chromosome:chromosome 6
Location:4709270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279150 TSD2 (1 of 2) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGGGGGCCGCAGGCCAGGTGCCGTACAGTCATGCCCGGACTGAGAGT
Internal bar code:CTGGTTTGTTATTAACGTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1917
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATGCGCGTATTACTGCT
Suggested primer 2:TTGCCTGTCCATCCCATTCC