| Common name: | TSD2 |
| Defline: | (1 of 2) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase |
| Description: | EC 6.1.1.12; aspartate-tRNA ligase, similar to eukaryotic aspartyl t-RNA synthetases (e.g., Medicago: GenBank ABE93908); probably cytosolic, based on Target-P |
| Synonyms: | Cre06.g279150.t1.1,TSD2,g6490.t1 |
| Chromosome: | chromosome 6 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.008076_3 | CLIP2.008076 | intron | 80 | 6.1 |
| CLIP2.008076_4 | CLIP2.008076 | intron | 80 | 6.1 |
| CLIP2.012275_1 | CLIP2.012275 | intron | 80 | 6.1 |
| CLIP2.012275_2 | CLIP2.012275 | intron | 80 | 6.1 |
| CLIP2.017049_1 | CLIP2.017049 | 3'UTR | 80 | 6.1 |
| CLIP2.017049_2 | CLIP2.017049 | 3'UTR | 80 | 6.1 |
| CLIP2.039388_3 | CLIP2.039388 | intron | 63 | 6.1 |
| CLIP2.044717_1 | CLIP2.044717 | intron | 80 | 6.1 |
| CLIP2.044717_2 | CLIP2.044717 | intron | 80 | 6.1 |
| CLIP2.044871_3 | CLIP2.044871 | intron | 63 | 6.1 |
| CLIP2.060306_1 | CLIP2.060306 | 3'UTR | 80 | 6.1 |
| CLIP2.060306_2 | CLIP2.060306 | 3'UTR | 80 | 6.1 |
| CLIP2.062147_1 | CLIP2.062147 | 5'UTR | 80 | 6.1 |
| CLIP2.062920_1 | CLIP2.062920 | 5'UTR | 80 | 6.1 |
| CLIP2.062920_2 | CLIP2.062920 | 5'UTR | 80 | 6.1 |
| CLIP2.078040_1 | CLIP2.078040 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.145096_1 | LMJ.RY0402.145096 | CDS | 58 | 5.5 |
| LMJ.RY0402.190806_1 | LMJ.RY0402.190806 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.190806_2 | LMJ.RY0402.190806 | 3'UTR | 95 | 5.5 |
| PFAM: | PF00152, PF01336 |
| PANTHER: | PTHR22594 PTHR22594:SF33 |
| KEGG_ec: | EC:6.1.1.12 |
| KEGG_orthology: | K01876 |
| KOG: | KOG0556 |
| Gene ontology terms:: | GO:0000166, GO:0003676, GO:0004812, GO:0004815, GO:0005524, GO:0005737, GO:0006418, GO:0006422 |
| Best arabidopsis TAIR name: | AT4G31180 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.