Insertion junction: CLIP2.039388_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.039388
Chromosome:chromosome 6
Location:4710855
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g279150 TSD2 (1 of 2) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCACGCACCTCGGAGCGGGCGGCGTCCACCAGCTCGAAGGGCAGGAC
Internal bar code:ATCTCTGTCGCGTCATATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATGGTCAAATACGCGAC
Suggested primer 2:AGAACCACCCGTGATGCAAT