Insertion junction: CLIP2.044871_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.044871
Chromosome:chromosome 6
Location:4708789
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g279150 TSD2 (1 of 2) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCTGGGCCCTACTTATGCTGCATTCGTGGCACGGTAGATCGATGCG
Internal bar code:GGATGCGTTGGCTAAGGCCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:159
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTTGCTGGAACAAACCC
Suggested primer 2:CGTACTTGCGCCTAGATCGT