Insertion junction: CLIP2.012275_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.012275
Chromosome:chromosome 6
Location:4710392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279150 TSD2 (1 of 2) 6.1.1.12 - Aspartate--tRNA ligase / Aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCTATGGTCTGCAGCTTACACTGACAGGTCAAACGCGGCCGAAGGCT
Internal bar code:GTGAACATTCCCTTCATTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1246
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTTGTTCCAGCAAGCAG
Suggested primer 2:TCCGTACATTGGCGTATCCG