Insertion junction: CLIP2.008109_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008109
Chromosome:chromosome 5
Location:2944414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755347 MUT6 Transgene and transposon silencing 6; (1 of 1) K12815 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 (DHX38, PRP16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTGCGTGAGGGGTTTTGGGTTTGCGAGGATCTCAAACCCCCACCCGA
Internal bar code:ATGTACCTCGGGGTGTCGTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:63
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTGGAGGTGGTTACATG
Suggested primer 2:TGCCTCTGTCCCCCTACTAC