Insertion junction: CLIP2.008109_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008109
Chromosome:chromosome 5
Location:2944414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre24.g755347 MUT6 Transgene and transposon silencing 6; (1 of 1) K12815 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 (DHX38, PRP16) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGTGCCCCCTGCGCCCGCCCCCCCCCCCGCACATTTACTAAGGCCGT
Internal bar code:TCAACCATCGGTTCGTATTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:100
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTCTGTCCCCCTACTAC
Suggested primer 2:GGGGTGGAGGTGGTTACATG