Insertion junction: CLIP2.008211_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008211
Chromosome:chromosome 12
Location:8466556
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g549800 CSK5 (1 of 3) K03097 - casein kinase II subunit alpha (CSNK2A); Casein kinase II-related Ser/Thr kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAACGTTGACGGGGAGGGTACAGAAGGGCCAGATGGAGAAGCACGAGG
Internal bar code:CTGGCTTATCGTTTGGTCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:254
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGAGGTGTATGAGGGTA
Suggested primer 2:ATCCAGTTTGCGACCTTCGT