Insertion junction: CLIP2.008642_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008642
Chromosome:chromosome 10
Location:4587123
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g451600 SRR28,SRR28B (1 of 1) PF00059//PF00704//PF14295 - Lectin C-type domain (Lectin_C) // Glycosyl hydrolases family 18 (Glyco_hydro_18) // PAN domain (PAN_4); Lectin-domain glycosyl hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCTTCTTGGAGTAACCGACATCGAACCCGCATGTTGCCTGCCTTCCT
Internal bar code:GGCTGGGGCTAAGGGTTTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4337
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:118
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:118

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCATCTCCACGGATTCG
Suggested primer 2:CGTCGCTTTCTGCATGTCAG