Insertion junction: CLIP2.008690_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008690
Chromosome:chromosome 10
Location:2637484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g437150 PPR6,CYCR5 PentatricoPeptide Repeat protein 6; (1 of 2) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGAAGCTAGCGCCACAGGTGAGTGCCAACATCGCTTTCCTGGCCGTTT
Internal bar code:ACAATGAGATAGGTTACGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3172
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCGAAGATCTCCACCG
Suggested primer 2:CTTGACTCGGCACAGGAACT