Insertion junction: CLIP2.008747_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008747
Chromosome:chromosome 6
Location:3005744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g274350 HTR5,HTR29 Histone H3; (1 of 35) K11253 - histone H3 (H3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAAGTCCTGGGCAATCTCACGCACCAGGCGCTGGAATGGCAGCTTGC
Internal bar code:AAGCTATGCCTCGGTTAAAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1906
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGTGATGCCCTGGATGT
Suggested primer 2:GCATAGTGGACGCATCAGGA