Insertion junction: CLIP2.008940_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008940
Chromosome:chromosome 17
Location:2947402
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719500 AOF9 (1 of 2) 1.3.99.29 - Phytoene desaturase (zeta-carotene-forming) / 2-step phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCCGACTCCCGTTCACGAGCCAGATTGTGCGGTCACCGTAAATGACC
Internal bar code:CTGTGTGTCGTACGTGGTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2587
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCCGTGCAACATCAAA
Suggested primer 2:TCTAACCACACCTGCTGCTG