Insertion junction: CLIP2.008940_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008940
Chromosome:chromosome 17
Location:2947420
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g719500 AOF9 (1 of 2) 1.3.99.29 - Phytoene desaturase (zeta-carotene-forming) / 2-step phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCATGACTTCGCATAACCTGACTGCACACTTTACACTGCAATAGTCAGT
Internal bar code:CTGTGTGTCGTACGTGGTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:456
LEAP-Seq percent confirming:59.2593
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCTAACCACACCTGCTGCTG
Suggested primer 2:CACTGCCGTGCAACATCAAA