Insertion junction: CLIP2.008966_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008966
Chromosome:chromosome 12
Location:5317795
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g528400 (1 of 1) PTHR22938:SF0 - ZINC FINGER PROTEIN 598 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGCGCCGGTTGGTCAGCTCACGGGCTATGCCAGCTTGCGGCGGTGGC
Internal bar code:GGTTATTATCCTGTGTATCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:6121
LEAP-Seq percent confirming:98.6111
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCTGATCCACTTGACTT
Suggested primer 2:AACACAACGAACTTGCGCTC