Insertion junction: CLIP2.009100_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.009100
Chromosome:chromosome 16
Location:4048291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690250 PUS18 TruB family RNA pseudouridine synthase; (1 of 1) K03177 - tRNA pseudouridine55 synthase [EC:5.4.99.25] (truB, PUS4, TRUB1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGGAGACCAGCTGCCGGCTCGGATGCTCGCGGTATTGCGTGACATACC
Internal bar code:GCCTTAATCGAGTTCGGCCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1116
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAACTACACCGTTGACG
Suggested primer 2:ATTCCTTTAGCTGCTGCCGT